BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D06LP1|AL427614
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig430 1857 0.0
>3x_Contig430
Length = 1969
Score = 1857 bits (934), Expect = 0.0
Identities = 954/962 (99%), Gaps = 1/962 (0%)
Strand = Plus / Minus
Query: 1 acgatgttctctgatcaagacatggaatgtatcactatttggaacccatcccaaaagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 acgatgttctctgatcaagacatggaatgtatcactatttggaacccatcccaaaagacc 1519
Query: 61 ggatttagkttttaatgggatagcagggtattgttgaatgttcaaatgcctttggaaact 120
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 ggatttaggtgataatgggatagcagggtattgttgaatgttcaaatgcctttggaaact 1459
Query: 121 ctcggggttattctgtaataaagtattaaccaaaccaaacaattgcatgaccaaattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 ctcggggttattctgtaataaagtattaaccaaaccaaacaattgcatgaccaaattatc 1399
Query: 181 ttgtctgatatcttcatggcccttgacaatatattgatagtctttaccatcgctaccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 ttgtctgatatcttcatggcccttgacaatatattgatagtctttaccatcgctaccctt 1339
Query: 241 gatagatagcctacgaggacgctgtttggatgaaataacagtaaatattggctcgaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 gatagatagcctacgaggacgctgtttggatgaaataacagtaaatattggctcgaaatg 1279
Query: 301 ggtaattctaatgacaggttttccggcatgatatgtacctggaacagcaagttctaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 ggtaattctaatgacaggttttccggcatgatatgtacctggaacagcaagttctaaatc 1219
Query: 361 tttcgcagcagctagttttggtgaaacatgttggagatccaacgtctgtaattgagggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 tttcgcagcagctagttttggtgaaacatgttggagatccaacgtctgtaattgagggag 1159
Query: 421 tttcctgctaatacgacggaagacattataatagatatcccaagcttggttaaggtkgtt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1158 tttcctgctaatacgacggaagacattataatagatatcccaagcttggttaaggttgtt 1099
Query: 481 gakagcttttgttctcttgtagttcattacccactcgtgggcatcgttcaaatccctacc 540
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 gatatcttttgttctcttgtagttcattacccactcgtgggcatcgttcaaatccctacc 1039
Query: 541 aaacgaattttggaacgaaatctcacgcaaggtttcaggaccacgttttagcatctcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 aaacgaattttggaacgaaatctcacgcaaggtttcaggaccacgttttagcatctcatg 979
Query: 601 caatggctccaaagtggcaaacatcttttccgtgttatgttcaccaaagaattgtctact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 caatggctccaaagtggcaaacatcttttccgtgttatgttcaccaaagaattgtctact 919
Query: 661 agcatcttcaagaccttcgtaccaaagttcgtgccacaaaacagcgactctgatcaattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 agcatcttcaagaccttcgtaccaaagttcgtgccacaaaacagcgactctgatcaattc 859
Query: 721 gtcacttactaattctgcttgatcgacaagtttaggactgtgcattctcatcttatctat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gtcacttactaattctgcttgatcgacaagtttaggactgtgcattctcatcttatctat 799
Query: 781 gatggacaaagctgccctctgtcttgagaccgaatcagatttaatggcaactgtcaatgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gatggacaaagctgccctctgtcttgagaccgaatcagatttaatggcaactgtcaatgg 739
Query: 841 atacactaatgcctgtggatgggctttacccaaatcagctagcaaagatagtaaagatct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atacactaatgcctgtggatgggctttacccaaatcagctagcaaagatagtaaagatct 679
Query: 901 actaacggtttgatttggttgatgaattcgggagatcaattgtggga-wacttctaacca 959
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 678 actaacggtttgatttggttgatgaattcgggagatcaattgtgggataacttctaacca 619
Query: 960 gt 961
||
Sbjct: 618 gt 617
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6054
Number of Sequences: 1807
Number of extensions: 6054
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)